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Global Ecology and Biogeography

Wiley

Preprints posted in the last 30 days, ranked by how well they match Global Ecology and Biogeography's content profile, based on 41 papers previously published here. The average preprint has a 0.02% match score for this journal, so anything above that is already an above-average fit.

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Wind pattern oscillations explain seabird movements at-sea: a nested multiscale approach

ROY, A.; Delord, K. C.; BARBRAUD, C.; TERRAY, P.

2026-04-03 ecology 10.64898/2026.04.01.715798 medRxiv
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Wind has a strong influence on the flight characteristics, movements, energetics, demography, life-history traits and biogeography of flying animals. With climate change affecting atmospheric circulation patterns at different time scales, understanding the links between wind and animal movements is crucial for predicting its impact on flying biodiversity. Most studies on the relationship between wind and seabird movements have, however, focused on local scales, exploring birds perceptive sensitivity to local wind. In this study, we examine low-level wind pattern oscillations in the Southern Indian Ocean at multiple time scales to explain the local- to large-scale movements of the Amsterdam albatross. Adult individuals exhibited smooth trajectories, strongly correlated with seasonal, intra-seasonal or interannual wind oscillations. Conversely, younger individuals displayed more erratic and exploratory movements, often being swept away by eastward moving low-pressure systems at a synoptic time scale. Our results suggest that Amsterdam albatrosses can learn and adapt to the annual and monthly low-level wind climatology and interannual variability of the Southern Indian Ocean. This also highlights the importance of investigating seabird movements in relation to broader-scale wind patterns to support their conservation in a changing climate due to human activities. A robust assessment of regional circulation response to climate change for upcoming decades could help project the impact of climate change on seabird movements and mitigate its effects.

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We might not notice a 'mass' extinction

Strona, G.; Bradshaw, C. J. A.

2026-04-09 ecology 10.64898/2026.04.07.716927 medRxiv
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Enhanced AbstractO_ST_ABSBackgroundC_ST_ABSThere is overwhelming evidence that global change is having widespread, detrimental impacts on biodiversity. Population declines and local disappearances have been recorded with increasing frequency across all taxa, resulting in a steady rise in the number of threatened species. However, the number of documented extinctions remains counterintuitively low ([~] 1000 species across all kingdoms) compared to the sense of emergency pervading the scientific community. In isolation, that figure might fuel scepticism about the biodiversity crisis, but when put into context, it reveals that current extinction rates might be comparable to those that occurred during past mass extinction events estimated from the fossil record ([&ge;] 75% extinctions within < 2 million years). Although this is an important clue supporting the claim that we might now be witnessing a new ( sixth) mass extinction, it falls short of definitive proof. The claim bears such high importance that it requires exceptionally solid foundations. However, our main aim was not to ascertain whether current extinction rates qualify as a new mass extinction event in progress. Instead, we examined the intersection of potential future loss scenarios and species discovery rates to address the fundamental question of whether and when we will be able to confirm a mass extinction is under way. AdvancesOur extrapolations suggest that the timing for a mass extinction to materialise (2,604-34,808 years from now at 75% diversity loss) is consistent with past mass extinctions (e.g., 12,000-108,000 years estimated for the Permian-Triassic extinction to unfold) under modern extinction rates (loss of 0.004%-0.053% of global species richness per year). We identify the minimum necessary conditions in which we could confirm a mass extinction under the full range of assumptions related to total species diversity (ranging from < 1.8 million to 163.2 million animal species) and discovery rates (e.g., [~] 13,110 new animal species described per year as of 2026, with the number growing by [~]77 species per year), and the associated timeframe required. We show that there are many realistic future scenarios where we would fail to detect a mass extinction in progress. OutlookBased on available evidence, the rate of global biodiversity loss might already be consistent with the standard definition of a mass extinction. But even if true, current extinction rate estimates (20-8343 times background rates) would not necessarily imply a mass extinction is currently unfolding, because this claim can only be verified a posteriori. Our projections instead indicate that there is a high risk of not recognising a mass extinction as it unfolds -- 49% across all parametrisations we explored. Furthermore, the temporal scale required for a mass extinction to materialise is orders of magnitude longer than relevant policy and legislative horizons, a mismatch that might appear to absolve todays society of responsibility. In reality, the opposite is true -- underestimating the likelihood of already being on a trajectory toward a mass extinction could have catastrophic consequences for future generations and historical accountability. Future generations will be forced to confront a world they perceive as normal, unaware of how much better off humanity could have been.

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How Five Decades Of Land-Cover Change Reshaped Suitable Habitat For Puerto Rican Tree Species

Moro, L.; Milesi, P.; Helmer, E.; Uriarte, M.; Muscarella, R.

2026-03-24 ecology 10.64898/2026.03.21.710527 medRxiv
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AimHuman land-use has dramatically altered the amount, quality, and connectivity of habitat for species worldwide. Understanding how these changes affect individual species is essential for predicting the overall consequences of land-use change for biodiversity. LocationThe Caribbean island of Puerto Rico. Forest cover on the island increased from about 18 to 45% from the late 1940s to the early 2000s. MethodsUsing data on geographic distributions and functional traits for 454 tree species, we evaluated how gain of potential habitat was related to species-specific climatic associations and life-history strategies. We estimated species-specific potential habitat (climatically suitable and forested) with species distribution models and data on forest cover. We characterized each species niche breadth (the range of environmental conditions it occupies) and niche position (the environmental conditions it prefers) to compare with the conditions in reforested areas. ResultsSpecies with relatively more potential habitat in 1951 (climatically suitable and forested) also had relatively larger gains in potential habitat from 1951 to 2000. Species that tend to occupy conditions different from those common in reforested areas (i.e., more marginal habitats) gained relatively less potential habitat and species with broad environmental niches gained more potential habitat. Additionally, species with relatively acquisitive functional traits gained more suitable habitat than those with relatively conservative traits. Main conclusionsOur results show that Puerto Ricos reforestation preferentially increased habitat for species that (1) already had suitable habitat in the landscape, (2) tolerate a wide range of climatic conditions, and (3) exhibit fast, acquisitive functional strategies. These findings illustrate how land-use change in heterogeneous tropical landscapes can generate non-uniform habitat gains across species, potentially favoring generalist over specialist species and reshaping community composition.

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Comparative food-web analysis of bluefin tuna spawning habitats in the eastern Indian Ocean and Gulf of Mexico

Stukel, M. R.; Landry, M. R.; Decima, M.; Fender, C. K.; Kranz, S. A.; Laiz-Carrion, R. L.; Malca, E.; QUINTANILLA, J. M.; Selph, K. E.; Swalethorp, R.; Yingling, N.

2026-03-20 ecology 10.64898/2026.03.18.711569 medRxiv
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Using linear inverse ecosystem modeling as a data assimilation tool, we compare spawning grounds of Atlantic and Southern Bluefin Tuna (ABT and SBT, respectively) based on results from field campaigns in the Gulf of Mexico (GoM) and eastern Indian Ocean off northwest Australia (Argo Basin). Both regions are warm, stratified, low-nutrient waters dominated by cyanobacteria (Prochlorococcus). Despite these similarities, the Argo Basin is more productive, with [~]1.5X higher net primary production and nearly 2X higher production of top trophic levels in the model (tuna larvae, planktivorous fish, and predatory gelatinous zooplankton). Higher primary production in the Argo Basin is mainly driven by higher N2 fixation and storm mixing of new nutrients in the upper and lower euphotic zone, respectively. Increased ecosystem efficiency (secondary production of top trophic levels / primary production) results from differences in plankton food web organization. In the GoM, protistan zooplankton are the direct consumers of nearly all phytoplankton production. In contrast, higher rates of herbivory by crustaceans feeding on nanophytoplankton combines with a higher impact of appendicularians on cyanobacteria to convert plankton production into larval tuna prey more efficiently in the Argo Basin. Despite similarities in the proportions of phytoplankton production mediated by cyanobacteria and other picoplankton in both systems, food web pathways to larval tuna and other planktivorous fish are substantially shorter in the Argo Basin. Our results highlight the impact of distinct zooplankton ecological niches on ecosystem efficiency and suggest a need for better inclusion of plankton food-web structure in models simulating climate impacts on fisheries production. HIGHLIGHTSO_LIDeveloped food web models of tuna spawning habitat (Indian Ocean & Gulf of Mexico) C_LIO_LISpawning habitats in the Argo Basin and Gulf of Mexico (GoM) are both oligotrophic C_LIO_LIArgo Basin had higher net primary production in part as a result of nitrogen fixation C_LIO_LIArgo Basin had higher rates of direct herbivory by metazoan zooplankton C_LIO_LIThis resulted in greater ecosystem efficiency in the Argo Basin. C_LI

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Biodiversity effects on ecosystem functioning: disentangling the roles of biomass and effect trait expression

Ardichvili, A. N.; Bittlingmaier, M.; Freschet, G. T.; Loreau, M.; Arnoldi, J.-F.

2026-03-19 ecology 10.64898/2026.03.17.711861 medRxiv
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O_LISpecies diversity potentially has a dual effect on communities: a generally positive effect on overall community biomass, reflecting the expression of species response and interaction traits, and a poorly characterised effect on mass-specific species contribution to ecosystem functions, reflecting the expression of their effect traits. Disentangling the effects of biodiversity on total biomass from those on effect trait expression would help settle a long-standing debate by clarifying how biodiversity relates to both facets of species effects on ecosystem functioning. C_LIO_LIFollowing the classical BEF approach, we calculate expected ecosystem function based on observed functioning in monoculture. We then derive a net biodiversity effect (NBE) and decompose it into four components: the classical complementarity and selection effects on total community biomass, and complementarity and selection effects on effect trait expression. The latter two reflect, respectively, a complementarity or facilitation in how effect traits influence the function, and how species with the highest potential for increasing the function become dominant in the community. C_LIO_LIWe illustrate this NBE decomposition with three ecosystem functions (nitrogen retention capacity, soil hydraulic conductivity improvement, and forage digestibility) measured in assembled communities under controlled experimental conditions of perennial grassland plants. Regarding nitrogen retention, we find a positive complementary effect via total biomass, but a negative biodiversity effect via effect trait expression. For hydraulic conductivity improvement, biodiversity effects are mostly mediated by total biomass. As for forage digestibility, we found a positive complementarity effect on trait expression, outweighed however by a negative selection effect. This analysis reveals how biodiversity may have contrasting effects on ecosystem functions via its impact on biomass and effect trait expression. C_LI SynthesisSeparating between the effect of biodiversity on plant community biomass and on effect trait expression at the community level is one important step towards understanding the pathways by which diverse plant communities drive ecosystem functioning.

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Repeated trends in altitudinal gradients of diversity: how habitat filtering and biotic interactions structure ecological communities

Fougeray, R.; Roy, A.; Penager, C.; Correa Pimpao, G.; Mori Pezo, R.; Charlet, L.-P.; Page, N.; Sculfort, O.; Gallusser, S.; Elias, M.; McClure, M.

2026-03-20 ecology 10.64898/2026.03.18.712335 medRxiv
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Understanding how biodiversity is structured along tropical elevational gradients requires disentangling the relative roles of regional evolutionary history and local processes shaping ecological assemblies. Here, Ithomiini butterfly communities were studied along repeated elevational gradients in two Neotropical regions with contrasting evolutionary histories: the Amazonian Andes and the Guiana Shield. The study tested whether similar elevational patterns of taxonomic, mimetic, and phylogenetic structure emerge despite distinct regional species pools, and whether abiotic and biotic factors contribute to shaping these patterns. Despite marked regional differences in overall richness, consistent elevational patterns emerged across both regions. Taxonomic and mimetic richness increased with elevation and were accompanied by stronger phylogenetic clustering, indicating that similar habitat filtering processes operate along altitudinal gradients irrespective of regional context. Phylogenetic {beta}-diversity was predominantly driven by lineage turnover, particularly in the Andes, highlighting the role of elevational gradients in promoting replacement of phylogenetically distinct lineages rather than simple species loss. These shared patterns suggest that altitude has a strong and repeatable effect on community structure, with habitat filtering acting locally on regionally distinct species pool. Abiotic factors such as temperature appeared to constrain species distributions at broad spatial scales, whereas biotic interactions acted more locally. In particular, butterfly diversity was positively associated with potential host plant richness and predation pressure, indicating that ecological interactions can further shape local community composition once broad-scale environmental constraints are accounted for. By integrating phylogenetic structure, biotic interactions, and environmental gradients across regions with contrasting evolutionary histories, this study shows how regional species pools and local ecological filtering jointly shape tropical biodiversity and highlights that similar elevational assembly processes could arise independently across the Neotropics.

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Invasion pathway predicts the axis of ecological niche reorganisation in freshwater crayfish

Miok, K.; Petko, O. N.; Robnik-Sikonja, M.; Parvulescu, L.

2026-04-07 ecology 10.64898/2026.04.05.716527 medRxiv
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AimUnderstanding whether invasive species retain or shift their ecological niches has traditionally relied on scalar overlap metrics that quantify the magnitude of niche change, but not its structure. Here, we test whether biological invasions involve a reorganisation of the environmental axes along which native and invasive ranges are differentiated, and whether the dominant axes of this reorganisation are consistently associated with invasion pathway type (intercontinental vs. within-continent). LocationGlobal (North America, Europe, Africa, Asia, Australasia). Time periodContemporary (environmental variables representing long-term averages, 1980-2021). Major taxa studiedFreshwater crayfish (Decapoda: Astacidea): Procambarus clarkii, Faxonius limosus, Pacifastacus leniusculus, Faxonius virilis, Faxonius rusticus. MethodsWe analysed native and invasive occurrences for five globally important crayfish invaders using [~]400 hydrologically resolved environmental variables from the Global Crayfish Database of Geospatial Traits. Classification models were used to quantify environmental differentiation between native and invasive ranges, and feature contributions were aggregated by environmental domain (climate, topography, soil, land cover). Patterns were evaluated across intercontinental and within-continent invasion pathways and assessed for robustness using cross-validation, permutation tests, sample-size sensitivity, and comparisons with classical niche overlap metrics. ResultsNative and invasive occurrences were consistently distinguishable across all species (accuracy 96.5-99.9%). A pathway-dependent pattern emerged: intercontinental invaders were primarily differentiated along climatic dimensions (58-76% of model importance), whereas within-continent invaders showed a more balanced contribution of climatic and topographic variables ([~]42% each), including strong signals from river network position. This contrast was stable across cross-validation folds (SD < 1.6%), and supported by permutation tests (P = 0.001). Classical niche overlap metrics (Schoeners D = 0.30-0.62) did not capture this qualitative distinction. Main conclusionsBiological invasions involve not only changes in niche position but a reorganisation of the environmental axes that distinguish species distributions. Our results suggest that the dominant axes of this reorganisation differ systematically with invasion pathway, reflecting whether species encounter novel climatic regimes or primarily shift within existing climatic space along topographic and network-position gradients. By resolving which environmental dimensions underpin native-invasive differentiation, this approach provides a complementary perspective to scalar overlap metrics and a basis for more mechanistic interpretations of invasion processes.

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Can tropical agamid lizards physiologically tolerate the altered thermal mosaic of urban microhabitats?

Razak, M.; Ben, A.; Dhere, S.; Thaker, M.

2026-04-08 ecology 10.64898/2026.04.06.716463 medRxiv
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Urbanization and human-induced environmental changes create unique and unprecedented thermal landscapes, yet the extent to which species respond to these changes remains poorly understood. One major challenge in studying these responses is the spatial mismatch between the small scale at which organisms experience their environment and the broader scale at which climate data are typically collected. We use Infrared Thermography (IRT) to quantify the fine scale microclimate in urban and rural habitats used by two tropical agamid lizards, Calotes versicolor and Psammophilus dorsalis. By combining field-based body temperatures and lab-based measures of thermal limits (CTmax, CTmin)and preferences (Tpref), we assess how the thermal heterogeneity of these fine mosaics of microhabitats influence the degree of thermoregulation (k) of these species. We find that thermal responses to urbanization are shaped by species-specific thermal traits and patterns of microhabitat use. Between the species, urban individuals did not differ markedly in habitat thermal heterogeneity, substrate temperature used or degree of thermoconformity. However, within species, P. dorsalis experiences warmer and more heterogeneous conditions in rural habitats, whereas C. versicolor experiences similar thermal conditions across habitats. Calotes versicolor also exhibits broader thermal tolerance and preferred temperature ranges than P. dorsalis. Collectively, our results suggest that P. dorsalis may be more susceptible to the thermal constraints imposed by human-modified landscapes. Overall, we demonstrate the critical need to account for microclimatic conditions and species-specific thermal traits when determining how animals respond to changes in the thermal environment expected from climate change.

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Patterns of host plant use by monarch butterflies revealed through annotation of more than 35,000 community science records

Freedman, M.

2026-04-08 ecology 10.64898/2026.04.06.716508 medRxiv
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Community science data are increasingly recognized as important resources for biodiversity research, in part because of the spatial and temporal resolution that they afford. While these data are useful for applications such as describing occurrence patterns, tracking movement of migratory animals, and recording phenological events, they can also be probed for "second-order" purposes, such as documenting species interactions. Here, I present a dataset of more than 35,000 annotated interactions between monarch butterfly (Danaus plexippus) larvae and their associated host plants from the community science platform iNaturalist. I document more than 70 unique species of milkweed hosts (Apocynaceae: Asclepiadoideae) used by monarch larvae, including a number of previously undocumented interactions. Monarchs show strong seasonal turnover in the species of host plants used across the migratory cycle, highlighting the importance of early season hosts like Asclepias viridis and A. asperula in eastern North America and A. californica and A. cordifolia in the west. I also demonstrate that non-native horticultural milkweed species have increased the spatial extent of monarch breeding during winter (November - February) by more than 60%, a pattern previously suggested from observational data but not formally quantified until now. To my knowledge, this represents the largest analysis to date of species interactions using unstructured community science data and highlights the value of platforms like iNaturalist for conducting fundamental research in ecology and conservation.

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Multidecadal changes in land cover across a disturbance gradient in mountain grasslands of Kyrgyzstan

Young, S. C. E.; Watkins, H. V.; Brownlee, S. F.; Yan, H. F.; Cote, I. M.

2026-03-27 ecology 10.64898/2026.03.24.712710 medRxiv
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Mountain ecosystems face unprecedented pressures from anthropogenic activities and climate change, challenging the productivity of these vital habitats. In the Tien Shan mountains, understanding localized responses to these pressures is often hindered by the coarse spatiotemporal resolutions of available data. To address this, we combined high-resolution satellite imagery (1997-2021) to map land-cover dynamics in the Naryn oblast, Kyrgyzstan across a gradient of grazing intensities. We classified and quantified land-cover distribution over 24 years, investigating the roles of topography, elevation, and anthropogenic disturbances as drivers of change. Our results identify intermediate elevations, high degrees of disturbance, and the interaction between the two as the primary contributors to recent transitions in grassland, forest, and barren habitats. By integrating Landsat analysis-ready data, European Space Agency WorldCover dataset and digital elevation models at fine spatial scales, we provide valuable contemporary and historical landscape and habitat-level insights and a high-resolution framework for disentangling climate-driven shifts from land-use impacts. These findings highlight the urgency of localized management in remote, data-poor regions where rapid environmental change threatens both biodiversity and pastoral livelihoods. Our work serves as a critical baseline for characterizing the adaptability of semi-arid mountain rangelands under escalating global and regional pressures.

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A quantitative approach to species occupancy across communities: the co-occurrence-occupancy curve

Ontiveros, V. J.; Mariani, S.; Megias, A.; Aguirre, L.; Capitan, J. A.; Alonso, D.

2026-03-20 ecology 10.64898/2026.03.19.712854 medRxiv
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Species tolerating the same environmental conditions can potentially colonize and thrive in the same habitats and eco-regions. Are any pair of those species equally probable to co-occur in the same community? Can we quantify the propensity of two species to co-occur together? Here, we focus on a simple but largely overlooked community-level pattern: the co-occurrence-occupancy curve, which relates the tendency of species to co-occur with others to their total occupancy across sites. We first define this empirical curve and then derive its expected shape under a random null model that assumes site equivalence and species independence. Building on these results, we introduce the Species Association Index (SAI), an occupancy-standardized measure that quantifies the tendency of a species to associate with others independently of its overall frequency of occurrence. The SAI enables meaningful comparisons among species with contrasting occupancies and provides a transparent benchmark against which departures from neutrality can be assessed. We illustrate the approach using two contrasting systems--tropical rain forest trees on Barro Colorado Island and organisms from Mediterranean rocky shores--highlighting both the generality of the co-occurrence-occupancy framework and its limitations.

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An eco-evolutionary approach to defining wildfire regimes

Harrison, S. P.; Shen, Y.; Haas, O.; Sandoval, D.; Sapkota, D.; Prentice, I. C.

2026-03-19 ecology 10.64898/2026.03.17.712312 medRxiv
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Fuel availability and fuel dryness are consistently shown to be the primary drivers of wildfire intensity and burnt area. Here we hypothesise that differences in the timing of fuel build up and drying determine the optimal time for wildfire occurrence. We use gross primary production (GPP) as a measure of biomass production and hence fuel availability, and vapour pressure deficit (VPD) as a measure of fuel drying. We use the phase difference in the seasonal time course and magnitude of GPP and VPD to cluster regions that should therefore have distinct wildfire behaviour. We then show that each of the resultant clusters is distinctive in terms of one or more fire properties, specifically number of ignitions, burnt area, size, speed, duration, intensity, and length of the wildfire season. The emergence of distinct regimes as a function of two biophysical drivers reflects the fact that both vegetation and wildfire properties are a consequence of eco-evolutionary adaptions to environmental conditions. We then examine the degree to which human activities or vegetation properties modify these fire regimes within each of these clusters. Variability in GPP and VPD largely explains the within-cluster variation in fire properties. The type of vegetation cover has an influence on burnt area and carbon emissions in particular, while human activities are more important for fire properties such as size, rate of spread and duration largely through their influence of landscape fragmentation. Although both human activities and vegetation properties modify wildfire regimes, the ability to distinguish wildfire regimes using GPP and VPD alone emphasizes that land management, fire use and fire suppression are constrained by environmental conditions. This eco-evolutionary optimality approach to characterising wildfire regimes provides a basis for designing a simple fire model for Earth System modelling.

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Overgrazing drives ant diversity loss and community homogenization in the Tumbesian dry forest in Ecuador

Gusman Montalvan, P.; Velez-Mora, D. P.; Ramon, P.; Gusman Montalvan, E.; Dominguez, D.; Donoso, D. A.

2026-03-20 ecology 10.64898/2026.03.18.712513 medRxiv
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O_LITropical dry forests are among the most threatened ecosystems globally, yet the consequences of livestock overgrazing for ant communities remain poorly documented, particularly in the Tumbesian biodiversity hotspot of southwestern Ecuador, where uncontrolled goat grazing constitutes the dominant disturbance agent. C_LIO_LIWe sampled ant communities (Formicidae) across a goat-grazing disturbance gradient in Zapotillo (Loja Province, Ecuador), establishing three disturbance levels (Dense, Semi-dense, and Open Forest) with nine 60 x 60 m plots per level (n = 27) and 486 pitfall traps. Community responses were assessed using abundance-based and presence-absence analyses of morphospecies richness, Hill-number diversity, community composition, beta diversity decomposition, and functional guild structure; vegetation structure was characterized using satellite-derived NDVI. C_LIO_LIWe recorded 47,459 individuals belonging to 22 morphospecies in six subfamilies. Morphospecies richness declined with disturbance (Dense: 19, Semi-dense: 15, Open: 12), with four specialist genera exclusive to Dense Forest. Beta diversity decomposition revealed a shift from turnover-dominated dissimilarity at moderate disturbance to nestedness-dominated dissimilarity at high disturbance, indicating progressive habitat filtering as the dominant community-restructuring process. C_LIO_LICommunity composition differed among disturbance levels (PERMANOVA: F = 4.49, R{superscript 2} = 0.272, p = 0.001) and was correlated with NDVI (r{superscript 2} = 0.341, p = 0.013). Cryptic/soil and Leaf-cutter guilds were nearly eliminated from Open forest while the Opportunist guild expanded markedly, indicating that functional homogenization precedes detectable taxonomic impoverishment. C_LIO_LIOvergrazing drives directional ant diversity loss and biotic homogenization at both taxonomic and functional levels in the Tumbesian dry forest, underscoring the conservation value of intact Dense forest. C_LI

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Nitrogen fertilization outweighs plant species loss in shaping bacterial belowground diversity in an alpine meadow on the central Tibetan Plateau

Wu, D.; Ciren, Q.; Jia, Z.; Schwalb, A.; Guggenberger, G.; Wang, S.; Dorji, T.; Pester, M.

2026-04-10 ecology 10.64898/2026.04.08.717155 medRxiv
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Plant species loss and nitrogen fertilization affect grassland biodiversity. However, their interactive effects on plant communities, soil properties, and the soil microbiome remain insufficiently understood. We analyzed how the removal of plant species, with and without urea addition, influenced plant diversity, soil properties, and soil bacterial communities in a Tibetan Plateau grassland. Continuous plant species removal and urea addition over seven years modified plant beta-diversity equally strong, while urea exerted a stronger negative effect on plant alpha-diversity. Both, plant species removal and urea addition caused soil acidification and an increase in NO2-/NO-, while dynamics in TOC, TON and TOC: TON were mainly driven by the growing season. Structural equation modeling identified soil acidification via urea addition as the most important indirect driver that negatively affected bacterial alpha-diversity and shifted bacterial beta-diversity. Urea addition also exerted direct negative effects on bacterial alpha- and beta-diversity, causing repression of oligotrophic (Acidobacteriota, Chloroflexota, Planctomycetota, Gemmatimonadota) and stimulation of copiotrophic (Bacillota, Bacteroidota, Pseudomonadota) bacterial taxa. Plant species removal caused slight increases in bacterial alpha-diversity, paralleled by less diverse but more even plant communities. We show that soil acidification by urea fertilization outweighs plant species loss in its negative effect on bacterial soil biodiversity in Tibetan grasslands.

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Multidimensional isotopic niches inform coexistence mechanisms in an Alpine ungulate community

Vanderlocht, C.; Galeotti, G.; Roncone, A.; Wells, K.; Tonon, A.; Ziller, L.; Lorenzetti, L.; Nava, M.; Corlatti, L.; Hauffe, H. C.; Pedrotti, L.; Cagnacci, F.; Bontempo, L.

2026-03-27 ecology 10.64898/2026.03.26.714152 medRxiv
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O_LIUnderstanding functional community structure and the niche-based mechanisms that enable coexistence among sympatric species is essential for explaining how biodiversity is maintained in natural systems, and for anticipating how ecological communities will respond to ongoing environmental change. Stable isotope analysis provides a process-oriented perspective on resource use by integrating information across time and space, thereby allowing reconstruction of realised isotopic niches that reflect multiple dimensions of ecological differentiation. C_LIO_LIWe applied this framework to a community of ungulates in the Central-Eastern Italian Alps, including red deer (Cervus elaphus), roe deer (Capreolus capreolus), and Alpine chamois (Rupicapra rupicapra). Using stable isotope ratios in summer-grown hair segments ({delta}13C, {delta}15N, {delta}34S, {delta}18O, {delta}2H), we quantified species-specific n-dimensional niche hypervolumes within a Bayesian framework and estimated niche regions, overlap probabilities, univariate differentiation and multivariate structure. C_LIO_LIDespite broad dietary overlap typically observed among these ungulates, we found clear isotopic niche segregation, with mean pairwise overlap consistently remaining below 40%. Three dimensions emerged as primary drivers of differentiation: water sourcing ({delta}18O), diet quality ({delta}15N), and habitat openness ({delta}13C). Specifically, chamois appeared to derive more water from plants in their diet rather than from drinking, and to consume a higher-quality diet compared to Cervids. Red deer relied more heavily on forested habitats for resource use compared to roe deer and chamois, and additional isotopic differences between red deer and roe deer may stem from fine-scale abiotic conditions like microclimate and topography. We found no isotopic evidence for differential niche breadth among the three ungulate species. C_LIO_LITogether, these patterns highlight functional differentiation across multiple ecological axes, offering mechanistic insight into how these ungulates segregate realised niche space despite substantial potential for resource overlap. This multi-element isotope perspective underscores the value of integrative, process-based approaches for understanding current coexistence as well as improving predictions of how mammal communities may reorganise under accelerating environmental change. C_LI

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FennoTraits: Dataset of plant functional traits and community composition in northern European flora

Niittynen, P.; Kemppinen, J.

2026-04-09 plant biology 10.64898/2026.04.07.716889 medRxiv
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We present here FennoTraits, which is a dataset of plant functional trait and community composition data which we collected from Fennoscandia across northern Finland, Norway, and Sweden in 2016-2025. This dataset has 42 049 abundance estimations and 155 794 functional trait observations from 10 traits representing 373 vascular plant species collected from 1 235 study sites within seven study areas. The trait measurements consist of size-structural, leaf economic, leaf spectral, and reproductive traits. The species represent the majority of the native vascular plant species that occur at the seven study areas, and many of the species occur in all seven areas across the two biomes and their ecotone: tundra and boreal forests. Each study area has distinct characteristics and a range of habitats: tundra, meadows, wetlands, shrublands, and boreal forests. These areas are under low anthropogenic influence, and many of the sites are within protected areas that are reserved for nature conservation and scientific research. Finally, we provide with this dataset a general description of the main trait patterns and profiles of the northern European flora.

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Delayed predator response increases ecosystem's vulnerability to collapse under a changing environment

Barreto Campos, A.; Prado, P. I.; Marquitti, F.

2026-04-09 ecology 10.64898/2026.04.06.716757 medRxiv
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Human activities are driving unprecedented environmental change, yet assessments of ecosystem resilience often overlook the rapid pace of change in the Anthropocene. Predator-prey systems are sensitive to the rate of environmental change and the whole system can collapse if predator population fail to promptly adjust to environmentally-driven shifts in resource population. Here, we investigate how different combinations of predator responsiveness and rates of environmental change influence the system vulnerability to critical transitions, explicitly addressing its interplay with magnitude of change. We found that, as predator responsiveness decreases, relatively slower rates and smaller magnitudes of environmental change leads to system collapse. Hence, even low and seemingly inoffensive total magnitudes of environmental change can be catastrophic if the rate of change is beyond a critical threshold. We propose considering predator responsiveness and current rates of environmental change as crucial factors in predicting the Anthropocenes impact on ecosystems.

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Size- and colour-based mechanisms shape the phenological structure of butterfly communities

Novella-Fernandez, R.; Brandl, R.; Chalmandrier, L.; Pinkert, S.; Talavera, G.; Zeuss, D.; Hof, C.

2026-03-27 ecology 10.64898/2026.03.26.713911 medRxiv
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O_LISeasonal patterns of species appearances constitute a major component of diversity variation. Theory attributes this phenological structuring of communities to the alignment of life cycles to suitable moments and to constraints of seasonality on development, yet the specific mechanisms operating across taxa remain largely unresolved. In insects, body size and colour are key functional traits that contribute to driving spatial community assembly through their link to thermoregulatory performance and development. C_LIO_LIHere we analyse variation in mean body size and colour lightness of 483 butterfly assemblages across Great Britain and throughout the season to test whether trait alignment with seasonal environment and developmental constraints may shape the phenological structuring of communities. C_LIO_LIBoth body size and body colour varied more along season than across space, emphasizing the importance of phenology on diversity variation. Body size was larger early and late in the season, i.e. under conditions of low temperature and solar radiation. This pattern contrasted with the spatial trends found and was driven by species overwintering as adults, which we interpret as being likely due to energetic constraints. Body colour, conversely, was darker early and late in the season, mirroring the spatial pattern found, and suggesting a thermoregulatory alignment with seasonal conditions. Furthermore, covariation between body size and colour suggests a thermoregulatory interaction between both traits. C_LIO_LIOur findings suggest that life-cycle constraints and seasonal thermoregulatory alignment contribute to shaping the phenological structure of insect communities. C_LI

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Coral restoration alters reef soundscapes but machine learning and manual analyses suggest different recovery rates

Croasdale, E. M.; Saponari, L.; Dale, C.; Shah, N.; Williams, B.; Lamont, T. A. C.

2026-04-02 ecology 10.64898/2026.03.31.710564 medRxiv
Top 0.4%
1.2%
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Coral restoration is recognised as a critical tool to mitigate pantropical degradation of reef ecosystems. Robust monitoring of restoration progress is crucial for projects to evaluate their success, improve practice, and share knowledge. However, traditional visual surveys often fail to capture the full impact of coral restoration on reef function. Therefore, we employed Passive Acoustic Monitoring (PAM) to assess whether the soundscape of a coral restoration site in the Seychelles differs from adjacent healthy and degraded reference reefs. We applied two methods of soundscape analysis: manual detection of unidentified fish sounds; and machine learning-based Uniform Manifold Approximation and Projection analysis. Results were approach-specific: the manual approach highlighted similarities in fish calls between the restoration site and the healthy reference reef, while the machine learning approach extracted broader soundscape patterns, clustering the restoration site alongside the degraded reference reef. Although this is a single-site study, these findings suggest that a) coral restoration alters reef soundscapes, though recovery time may be taxon-specific, and b) multiple metrics are needed to bridge single-taxon and broad soundscape scales. This study contributes to the evolving field of soundscape ecology in coral reef ecosystems, highlighting the utility of PAM in monitoring changes to reef function through coral restoration.

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Mapping small-scale ephemeral surface water to inform transfrontier conservation planning in southern Africa

Swift, M. E.; Songhurst, A.; McCullogh, G.; Beytell, P.; Naidoo, R.

2026-04-04 ecology 10.64898/2026.04.03.715600 medRxiv
Top 0.5%
1.1%
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Reliable freshwater access drives terrestrial wildlife movements and habitat use globally. The small, rain-fed seasonal pools critical for dryland wildlife persistence are vulnerable to rising temperatures and unstable precipitation regimes projected under climate change. In southern Africa, which is expected to warm rapidly by 2100, the drying and disappearance of surface water may cause a breakdown in seasonal migrations of large, area-sensitive, and water-dependent wildlife species. Furthermore, the disappearance of ephemeral water may concentrate wildlife around remaining surface water, increasing resource competition and human-wildlife conflict. An accurate understanding of the dynamics and drivers of seasonal surface water will therefore be critical to wildlife and human health as climate change intensifies. Here, we present a framework and empirical analysis of fine-scale surface water mapping in the 520,000km2 Kavango Zambezi Transfrontier Conservation Area (KAZA), the worlds largest terrestrial conservation area. From 2019-2025, we implemented Otsu thresholding on median Automated Water Extraction Index imagery from 10m Sentinel-2 MSI, leveraging high wet season contrast between vegetation and water as a dry season positive mask. We created >35 quasi-monthly KAZA-wide Ephemeral Surface Water (ESW) rasters (mean classification accuracy 87%, compared to 50% accuracy for existing water products), and found wet season precipitation drivers of non-riparian water fill levels did not extend into the dry season. Then, using GPS data from 27 African savanna elephants (Loxodonta africana), which typically visit water every 48 hours, we compared elephant water visitation rates based on ESW to existing 30m Global Surface Water (GSW) maps. Models using ESW estimated 99% of elephant data came within a 48-hour window, compared to 42% for GSW, suggesting that ESW is a better proxy for actual wildlife water use in animal movement modeling. As aridification threatens to diminish surface water resources, we must model the drivers of wildlife movements at the scale of wildlife needs. With ESW, we provide fine scale accessible surface water data and a straightforward coding architecture for applications beyond KAZA.